I note that you only alllow 512 favorites. That's OK but now how do I remove the bookmarks I don't want. Your method seems to remove them from IE as well which I do not want to do.

Actually... For the favorites, K-Meleon does <b>not</b> create a copy for its use. Instead it just reads the same files IE uses. So if you wanted seperate ones, you'd have to export favorites from IE and use the bookmarks plugin for K-Meleon.